Infection, immunity, inflammation
Animal alternative to assess infection and antibiotic resistance

Our immune system protects us against infection, but may cause disease if not properly regulated. Understanding how the immune response is triggered and controlled is thus an important area of research. This group brings together basic scientists and clinicians to link our laboratory-based studies with clinical applications to drive improved diagnostic and therapeutic strategies for infectious disease and other conditions, including cancer and neurodegeneration. We focus on the following.

  • Innate immunity, in particular how host immune cells sense and respond to pathogens. 
  • Antimicrobial resistance and the development of novel antimicrobial therapies.
  • Viral pathogenesis and the application of self-disseminating viral vaccines.
  • We are using cell models of infection to reduce and replace the use of animals in infection research as part of our commitment to the 3R agenda.
For a broader overview of work in this area across the whole faculty view our faculty infection, immunity, inflammation page.

Liver research

Matthew Cramp 
   
Matthew heads the Hepatology Research Group, who carry out a range of clinical and research projects here at Plymouth. This focuses on protection from hepatitis C virus infection (Matthew Cramp); lipid metabolism and the pathogenesis and treatment of non-alcoholic steatohepatitis (David Sheridan); immune dysfunction and biomarkers of outcome in alcohol-related liver disease (Ashwin Dhanda); and molecular virology of hepatitis viruses (Dan Felmlee).


Monocytes in liver tissue from a patient with alcoholic hepatitis.

Molecular mechanisms of lung macrophage functions

Gyorgy Fejer

Macrophages are crucially involved in various infectious diseases, cancer, metabolic disorders and also in normal tissue homeostasis. Studies are hampered by the limited life-span and restricted numbers of primary tissue macrophages that can be obtained for experiments. We have therefore established a novel, continuously growing, non-transformed model of lung alveolar macrophages (AMs), cells that play key roles in important diseases such as lung infection, asthma and chronic obstructive pulmonary disease. This new system has already made possible the identification of several, previously unknown, innate immune phenomena in AMs and we are now analysing the underlying molecular details to allow development of drugs that can influence AM activity in various pathology states.

Image shows AMs in culture

 

Understanding macrophages

Andrew Foey

Macrophages are at the forefront of immune defence against pathogens and tumours. They exhibit a degree of functional plasticity which, when dysregulated, contribute to inflammatory pathology and cancer. Research centres on the role of mucosal macrophages in homeostasis and pathology; with the specific aim of manipulation of plasticity and functional activation/suppression as a future cell-based therapeutic regimen in the treatment of gut diseases (Crohn’s disease, ulcerative colitis, colorectal cancer) and oral mucosal diseases (chronic periodontitis and oral squamous cell carcinoma).

Skeletal pathology

Simon Fox

The skeleton constantly remodels in response to changes in mechanical load, serum calcium and micro-damage. This dynamic process generates a bone mass and structure optimised to current physical and mineral requirements. At a cellular level remodelling is performed by osteoblasts that secrete and mineralise new bone matrix and osteoclasts that resorb bone. Osteoblast and osteoclast activity is tightly regulated such that during each remodelling cycle osteoblast formation is temporally coupled to resorption ensuring there is little net bone loss. However, this balance is disrupted in many skeletal disorders such as post-menopausal osteoporosis, breast and prostate cancer. Our work aims to understand the mechanisms leading to the disruption of bone cell activity and assess the beneficial impact of potential novel nutritional factors on tumour and bone cell function.

Combating sepsis

Simon Jackson

Inflammation is the cornerstone of innate immune defence against infection but may also cause tissue damage and pathology if not properly regulated. An example is sepsis, a clinical emergency that carries a high mortality. Sepsis is a consequence of disregulation of the inflammatory response. Moreover, inflammatory responses underlie a variety of diseases and chronically may trigger conditions such as atherosclerosis and neurodegeneration. Therefore, understanding the regulation of inflammation is key to developing effective treatments for sepsis and prevention of many disease states. Our group has been investigating how cells of the innate immune system respond to infectious stimuli to produce inflammatory mediators. We are elucidating these mechanisms to find targets for new anti-inflammatory therapies.

Self-disseminating vaccines


Throughout history most pathogens have been acquired by transmission from animal reservoirs (called a zoonotic infection). Ebola virus infection in humans (from chimpanzees and gorillas), and bovine tuberculosis infection in cattle (from badgers) are two examples of ongoing zoonotic diseases from wild animal populations. Vaccination of such animal populations in the wild is impossible using conventional approaches due to the need for inoculation of individual animals. An exciting new method we are testing is to insert regions from Ebola virus and TB into harmless viruses normally carried by these animals, and to use them as 'disseminating' vaccines that are able to spread through the entire population. This has the added value of also protecting the wild animals.

Bone repair

Vehid Salih

The increased use of biodegradable synthetic or natural scaffolds combined with cells and/or biological molecules, in order to create functional replacement tissue in a damaged tissue site, has led to the need for the development of suitable biocompatible methods in the area of tissue engineering. This will inform and help create safe, high quality products for use both in vitro and in vivo. Numerous tools are now available to create 3D tissue models in vitro, but translating these effectively to clinical use has had limited success. Our work aims to develop culture systems for a variety of tissue types to promote assays for in vitro tissue modelling, and in particular for oral tissues and conditions.

Plugging the gaps in the antibiotic discovery pipeline

Mathew Upton

The WHO have declared that antibiotic resistance is one of the major threats to human health and the Chief Medical Officer recently raised this issue nationally. However, there is still a real need to discover novel antibiotics. Infections caused by drug resistant pathogens are a significant cause of morbidity and mortality and pan-resistant organisms are becoming less rare. My group runs a programme of natural product screening for discovery of bacteriocins, antimicrobial peptides produced by bacteria. The programme is supported by use of next generation sequencing methods to determine bacterial genome sequences and generate metagenomic datasets that can be interrogated with various software tools for identification of putative bacteriocins. Lead compounds are being developed towards clinical use with commercially focused funding from BBSRC and other sources.

Improving oral health

Svetislav Zaric

Periodontitis is a chronic inflammatory disease of the tissues supporting the teeth. My research interests include microbiology of periodontal diseases, host-pathogen interactions, Toll-Like Receptors signalling, immunopathogenesis of chronic inflammation and mechanisms involved in the resolution of inflammatory response (endotoxin tolerance). I am particularly interested in the chemical composition of Porphyromonas gingivalis LPS, modifications of its lipid-A structure, sialylation of O-specific polysaccharide chains and the consequences these changes have on the host immune response. Other areas of my research interest are molecular and cellular mechanisms responsible for tissue injury during inflammation, identification of therapeutic targets for resolution of inflammation and oral-systemic health connection.

SEM of subgingival dental plaque from a chronic periodontitis patient