Innovative plankton monitoring tool holds key to assessing health of ocean life

Researchers from the University helped to create the Plankton Lifeform Extraction Tool

Plankton under the microscope (Credit: Marine Biological Assocation)

7 December 2021

Researchers from the University of Plymouth have helped to create a free, online tool to make complex plankton datasets easier and more accessible for all.

The Plankton Lifeform Extraction Tool (PLET) brings together separate plankton datasets into one central database and formats the data into pre-defined lifeforms, making it easier for marine biologists to access robust, reliable plankton data.

This data will give a more accurate picture of the spatial and temporal location of ocean plankton and in turn provide data and critical information to inform policy, public interest and scientific discovery.

The online tool, hosted by the Archive for Marine Species and Habitats Data (DASSH) was developed by researchers from 15 partners across Europe.

Dr Abigail McQuatters-Gollop, Associate Professor of Marine Conservation at the University of Plymouth, worked on the project along with former postdoctoral researcher Dr Jacob Bedford. She said:

“We are fortunate in the UK to have so many consistent plankton time-series. Because PLET allows us to interpret these data holistically for the first time, we can now provide increasingly robust evidence for policy makers to make decisions. Maintaining these datasets is key to progressing our understanding of plankton change and managing our seas sustainably.”

"Learning about overfishing, coral bleaching, climate change – those human pressures – showed me I actually need to understand people and connect them together" - read more about Abigail and her research

Dr Abigail McQuatters-Gollop

Lead author Dr Clare Ostle, from the Marine Biological Association, said:

“This has been many years in the making, and it’s great to see it come together. Plankton underpin so many important processes in the marine world, and making that data more user-friendly and accessible is key to answering important questions.”

Plankton form the base of the marine food web, help to regulate the ocean chemistry and provide approximately half of the world’s oxygen.

Because plankton have short life cycles, drift freely in the ocean and have wide distributions, they are sensitive indicators to climate change, and therefore play an important role for scientists monitoring changes in ocean biodiversity.

Although there are a number of programmes that monitor plankton, the lack of direct comparison between datasets means that assessing plankton changes has been difficult and limited.

The PLET organises European plankton datasets into functional groups – ‘lifeforms’ based on shared biological traits. By arranging this data into lifeform groupings, more can be learnt about the health of marine ecosystems.

Dr Mike Best from The Environment Agency said:

“Having data from so many organisations in one place allows us to accurately access the health of the plankton in our seas and take appropriate actions to protect and preserve the food webs they sustain.”

The PLET was built by the Marine Biological Association, the University of Plymouth and Plymouth Marine Laboratory (now working in partnership as Marine Research Plymouth), and 13 other universities and research institutes across the UK and Europe.

Currently, PLET is used in the North East Atlantic and North Sea but the research team hope that the free and easily accessible tool will encourage marine biologists all over the world to input and access data.

The PLET currently holds 155,000 samples containing over 44 million plankton records collected across Europe between 1924 and 2017. The longest time series dataset was collected from the Marine Biological Associations’ Young Fish Trawl survey starting in 1924.

Project co-ordinator for DASSH Dan Lear said:

“Drawing on the expertise and unique infrastructure that the MBA has developed as a MEDIN Data Archive Centre and UK node of OBIS; we have been able to deliver a scalable and robust toolset to support informed policy making.”

The full study - Ostle et al: The Plankton Lifeform Extraction Tool: a digital tool to increase the discoverability and usability of plankton time-series data - is published in Earth System Science Data, DOI: 10.5194/essd-13-5617-2021.

Marine Research Plymouth

The University of Plymouth, the Marine Biological Association and Plymouth Marine Laboratory have joined forces to launch Marine Research Plymouth.

Collectively hosting the largest number of marine scientists in any UK city – and the greatest number of undergraduate and postgraduate marine students anywhere in the country – the partnership aims to cement the city's place as the UK's go-to location for marine and ocean science.

Marine Research Plymouth will encourage joint investment in research appointments and support the sharing of capabilities, equipment and facilities. It will also ensure Plymouth is even better-placed to attract further funding for initiatives that can advance knowledge and understanding of the oceans.

The Plankton and Policy Research Group

The group focuses on applying and implementing marine conservation policy in the UK and Europe, with a focus on planktonic systems. By visiting our website, you can learn about our ecological research, outreach activities and policy work

Visit the Plankton and Policy Research Group website

Read more about our plankton research and expertise

Marine Research Plymouth

The Plankton and Policy Research Group